FastQCFastQC Report
Wed 8 May 2024
EGAF00007962359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464958
Total Bases14.4 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27920.6004843448225431No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10520.22625699525548543No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8860.1905548458140305No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5600.12044098606755879No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)