FastQCFastQC Report
Wed 8 May 2024
EGAF00007962645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495707
Total Bases15.3 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42540.8581682324437621No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22660.45712487416962033No Hit
ATGTCCAACATGGACATCGATGGTATTAACA7450.15029039331701993No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7380.14887826881605465No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5520.11135610350469127No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)