FastQCFastQC Report
Wed 8 May 2024
EGAF00007962711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496415
Total Bases16.3 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG11150.22461045697652166No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6730.13557205161004401No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5830.11744205956709607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)