FastQCFastQC Report
Wed 8 May 2024
EGAF00007962721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences459890
Total Bases15.1 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22140.48141946987323053No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG17980.3909630563830481No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8490.18460936310856943No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7760.1687360020874557No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCCAG6210.13503229033029637No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT5830.12676944486725086No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG5530.12024614581747808No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC5400.11741938289590989No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5250.1141577333710235No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC4950.10763443432125074No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC4780.10393789819304618No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT4600.1000239187631825No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)