FastQCFastQC Report
Wed 8 May 2024
EGAF00007962723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497313
Total Bases16.4 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACTGTCCTCTGGCTACCGCATCAACCGTGCT6640.13351752316951296No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG6500.13070239466895095No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5910.11883863884515386No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC5360.10777920545008877No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)