FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007962725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480083
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23890.49762228614635384No Hit
AAACTGTCCTCTGGCTACCGCATCAACCGTGCT6660.13872601196043183No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG6560.13664303880787282No Hit
GCGGCTGGTCTGGCAATTTCTCAGCGCATGACC4900.1020656844753928No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC4850.10102419789911328No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)