FastQCFastQC Report
Wed 8 May 2024
EGAF00007962727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495918
Total Bases16.3 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7120.14357212281062595No Hit
AAACTGTCCTCTGGCTACCGCATCAACCGTGCT6200.12502066873959003No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5820.11735811162329256No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC5670.11433341802475408No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTCAG5220.10525933722913869No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)