FastQCFastQC Report
Wed 8 May 2024
EGAF00007962729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484515
Total Bases15.9 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23330.48151244027532686No Hit
AAACTGTCCTCTGGCTACCGCATCAACCGTGCT6950.14344241148364859No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG6520.13456755724796962No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC4990.10298958752567001No Hit
AAACGTATCAACAGCGCTGCCGACGACGCAGCT4940.10195762773082362No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)