FastQCFastQC Report
Wed 8 May 2024
EGAF00007962815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472757
Total Bases15.6 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTATT11530.24388850931874093No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA6300.13326085071188792No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5850.12374221851818165No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC5260.11126223408643342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)