FastQCFastQC Report
Wed 8 May 2024
EGAF00007962873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451979
Total Bases14.9 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7030.15553819978361827No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5490.12146582031466063No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5390.1192533281413517No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT4700.10398713214552002No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)