FastQCFastQC Report
Wed 8 May 2024
EGAF00007962903

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962903
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461300
Total Bases15.2 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23730.5144157814871017No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG13990.3032733579015825No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT12060.2614350747886408No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC7260.157381313678734No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT7140.15477996965098634No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC6640.14394103620203771No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG5190.11250812920008671No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT4880.10578799046173856No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC4810.10427053977888576No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)