FastQCFastQC Report
Wed 8 May 2024
EGAF00007962949

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962949
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504264
Total Bases16.6 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24710.49002110005869937No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG14330.28417654244602036No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7800.15468088144305364No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGAGC6960.13802294036457094No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT5620.11144955816794377No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)