FastQCFastQC Report
Wed 8 May 2024
EGAF00007963005

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963005
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513695
Total Bases15.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24550.4779100438976436No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11750.22873494972697805No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6140.1195261779849911No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5650.1099874439112703No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5560.10823543153038281No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)