FastQCFastQC Report
Wed 8 May 2024
EGAF00007963151

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963151
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440463
Total Bases13.6 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG54511.2375613842706423No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24710.5610005834769323No Hit
GGTCCGGGCATTAACCCAATCAGCAAAACCG15930.36166488445113437No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT12910.29310066906868454No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8480.1925246842527068No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG7310.16596172663765174No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7260.16482655750880323No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG6900.156653339781094No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT6880.1561992721295546No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6870.15597223830378487No Hit
TGGCGCCCTGCCCCGTGGACCCCGAACCCGC6400.14530164849260893No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT6010.13644732928759057No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG5820.13213368659796623No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5570.1264578409537237No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5120.11624131879408714No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC5060.11487911583946891No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG4720.10715996576329907No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC4720.10715996576329907No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC4510.10239225542213536No Hit
GCCCGCCCGGAAACTCCATCCCCGGCAATCC4500.10216522159636565No Hit
CGTGGCCAGAGCCGTGGCCGTGGCCGTGGTC4460.10125708629328684No Hit

[OK]Adapter Content

Adapter graph