FastQCFastQC Report
Wed 8 May 2024
EGAF00007963207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469999
Total Bases14.5 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59871.273832497515952No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17400.37021355364585884No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10140.21574513988327637No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC6070.129149210955768No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5750.12234068583124645No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5440.11574492711686621No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG4840.10297894250838832No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4830.10276617609824702No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)