FastQCFastQC Report
Wed 8 May 2024
EGAF00007963291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478046
Total Bases14.8 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13900.29076699731824973No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12560.2627362220372098No Hit
ACTCTGACCGGTAAAGTTGAGGATAACCACG10050.21023081460779924No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5750.12028131184028315No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)