FastQCFastQC Report
Wed 8 May 2024
EGAF00007963461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450239
Total Bases13.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23330.5181692390041733No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16030.3560331290714487No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11270.25031150122490503No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6150.13659412001181595No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5910.1312636177674524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)