FastQCFastQC Report
Wed 8 May 2024
EGAF00007963515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521957
Total Bases16.1 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT38350.7347348536373686No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28960.5548349768275931No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19510.3737855800382024No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA8360.16016645049304828No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7100.13602653092112954No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7070.13545177093132194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)