FastQCFastQC Report
Wed 8 May 2024
EGAF00007963625

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963625
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences482987
Total Bases14.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31810.6586098590645297No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8300.17184727539250538No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6780.14037644905556465No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5670.11739446403319342No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4880.10103791613438871No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)