FastQCFastQC Report
Wed 8 May 2024
EGAF00007963647

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963647
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441295
Total Bases13.6 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG66151.4989972694002878No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21230.4810840820766154No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG8830.20009290837195073No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7610.17244700257197568No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4480.1015193917900724No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)