FastQCFastQC Report
Wed 8 May 2024
EGAF00007963651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007963651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449770
Total Bases13.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG68601.525224003379505No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22190.4933632745625542No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG9220.2049936634279743No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7680.17075394090312826No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4980.11072325855437223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)