FastQCFastQC Report
Wed 8 May 2024
EGAF00007966614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007966614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467909
Total Bases15.4 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG15930.3404508141540342No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6590.14083935124137387No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5820.12438315997341365No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)