FastQCFastQC Report
Wed 8 May 2024
EGAF00007966618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007966618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences471647
Total Bases15.5 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22110.4687827973039158No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7400.15689700135906726No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG4980.10558744145515608No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC4930.10452732658110832No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)