FastQCFastQC Report
Wed 31 May 2023
EGAF00007967399

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967399
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134765427
Sequences flagged as poor quality0
Sequence length50
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3627810.26919441289641743No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1711060.1269657981345616No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG1423410.10562130300674223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)