FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007967406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134262761
Sequences flagged as poor quality0
Sequence length50
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCG1481410.11033662565601492No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1351620.10066976054514476No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)