FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007967439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164987907
Sequences flagged as poor quality0
Sequence length50
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5896350.3573807382137407No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG2048320.1241497051053566No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)