FastQCFastQC Report
Wed 31 May 2023
EGAF00007967485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144218454
Sequences flagged as poor quality0
Sequence length50
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5690850.39459929309740066No Hit
GTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTTACACATGCAA1688520.1170807170072701No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)