FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007967577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences231156113
Sequences flagged as poor quality0
Sequence length50
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4170790.18043174138336546No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCA2597820.11238378973780372No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)