FastQCFastQC Report
Wed 31 May 2023
EGAF00007967617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99256050
Sequences flagged as poor quality0
Sequence length50
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2507270.2526062643032843No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCA1643400.16557177119178126No Hit
CCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCATTGCACTC1134600.1143104123123981No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)