FastQCFastQC Report
Wed 31 May 2023
EGAF00007967726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116955086
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCG2006540.1715650057322005No Hit
CCCACTACCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGC1623930.1388507379661967No Hit
CCACAAATTATGCAGTCGAGTTTCCCACATTTGGGGAAATCGCAGGGGTC1231070.1052600653895462No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)