FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007967795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116401743
Sequences flagged as poor quality0
Sequence length50
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8660920.7440541504606163No Hit
GTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTTACACATGCAA2672020.22955154546096443No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG1778010.1527477127211059No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA1543240.1325787707491631No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG1299920.11167530369369126No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGAT1245370.10698894775140955No Hit
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTG1239420.1064777870207665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)