FastQCFastQC Report
Wed 31 May 2023
EGAF00007967833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98209422
Sequences flagged as poor quality0
Sequence length50
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10901651.1100411526706675No Hit
GGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCCA1070890.10904147261960263No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)