FastQCFastQC Report
Wed 31 May 2023
EGAF00007967875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007967875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137353844
Sequences flagged as poor quality0
Sequence length50
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13929031.0140983021924017No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG1464020.10658747926996495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)