FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007969574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007969574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2559801
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG235990.9219076014112034No Hit
CTGGGACACAGCTGAG55300.21603241814500423No Hit
TTCTATGACGCTTTGA49460.19321814469171625No Hit
GTAGGTGGATGGTCCG47080.18392054694876672No Hit
CCAGAATACCAGTCCG45500.17774819214462376No Hit
TTATCGACTTCATGCA44810.17505267010990308No Hit
TACATTGCTACACCTA43700.17071639553230897No Hit
ACCTCACACACGTGCC34620.13524488817685437No Hit
CTCGGATCTTCATTTC31120.12157195031957561No Hit
CGCTTGTACTGTGCTA30330.11848577291750415No Hit
ATCACGATGTTGCAGT28750.11231341811336117No Hit
ACGGCTTCTGTACGTT26030.1016875921214188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)