FastQCFastQC Report
Fri 4 Aug 2023
EGAF00007979749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007979749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5787992
Sequences flagged as poor quality0
Sequence length151
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTA96630.1669490904617698TruSeq Adapter, Index 7 (97% over 36bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)