FastQCFastQC Report
Sun 23 Apr 2023
EGAF00007981105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007981105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39066733
Sequences flagged as poor quality0
Sequence length35-101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG463900.11874553216415613No Hit
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT411950.10544777317314964No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC394660.10102201276979061No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)