FastQCFastQC Report
Wed 8 May 2024
EGAF00007981258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007981258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96633
Total Bases640.2 Mbp
Sequences flagged as poor quality0
Sequence length2-181218
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)