FastQCFastQC Report
Thu 23 May 2024
EGAF00007981277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007981277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3314115
Total Bases13.9 Gbp
Sequences flagged as poor quality0
Sequence length3-173491
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)