FastQCFastQC Report
Wed 8 May 2024
EGAF00007981291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007981291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22253
Total Bases76.8 Mbp
Sequences flagged as poor quality0
Sequence length119-106483
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)