FastQCFastQC Report
Thu 23 May 2024
EGAF00007981333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007981333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2845964
Total Bases8.3 Gbp
Sequences flagged as poor quality0
Sequence length37-207471
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG175020.6149761557068185No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT71710.25197086119149786No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32900.1156023055808155No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)