FastQCFastQC Report
Sun 19 May 2024
EGAF00007981337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007981337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2251198
Total Bases17.7 Gbp
Sequences flagged as poor quality0
Sequence length32-257680
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG370661.6465011074103655No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT163520.7263688045209706No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA73250.32538230755357817No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50620.22485805335647951No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)