FastQCFastQC Report
Wed 8 May 2024
EGAF00007981359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007981359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26300
Total Bases116.1 Mbp
Sequences flagged as poor quality0
Sequence length195-83868
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT390.1482889733840304No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG350.13307984790874525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)