FastQCFastQC Report
Sun 21 May 2023
EGAF00007984473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007984473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10219717
Sequences flagged as poor quality0
Sequence length0-50
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACCGTTACCATTACTGAGTA267899226.213954848260475No Hit
AAACCGTTACCATTACTGAGTTA3375523.3029486041541074No Hit
AAACCGTTACCATTACTGAGCA2504752.4508995699195975No Hit
AAACCGTTACCATTACTGAGA2227852.179952732546312No Hit
TGAGGTAGTAGATTGTATAGTA2223642.1758332446974804No Hit
TCCTGTACTGAGCTGCCCCGAGA2189972.142887126913593No Hit
TGAGGTAGTAGTTTGTGCTGTTA1990371.9475783918478369No Hit
TGAGGTAGTAGTTTGTACAGTTA1975831.9333509920088785No Hit
TGAGGTAGTAGATTGTATAGTTA1800231.7615262731834942No Hit
TGAGGTAGTAGTTTGTACAGTA1342731.3138622136014138No Hit
TATTGCACTTGTCCCGGCCTGTA1315121.2868458099182198No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACTA923750.9038900000851295No Hit
TGAGGTAGTAGGTTGTATAGTA862060.8435262933406082No Hit
AAACCGTTACCATTACTGAGGA805290.7879768099253628No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACA800850.7836322669208942No Hit
TGAGGTAGTAGGTTGTATAGTTA595470.5826677979439157No Hit
TCCTGTACTGAGCTGCCCCGAA556880.5449074568307517No Hit
TCCTGTACTGAGCTGCCCCGAGAA553640.5417371146383017No Hit
TGAGGTAGTAGGTTGTGTGGTA548650.5368543962616578No Hit
AAACCGTTACCATTACTGA531030.5196132143385184No Hit
AGCAGCATTGTACAGGGCTATGA522370.511139398478451No Hit
TGAGGTAGTAGTTTGTGCTGTA497520.4868236566628998No Hit
CATTGCACTTGTCTCGGTCTGAA453720.4439653270242219No Hit
AAACCGTTACCATTACTGAGTTTA415940.40699757145917054No Hit
TCCTGTACTGAGCTGCCCCGAGTA358390.3506848575161132No Hit
TAGCAGCACGTAAATATTGGCGA351740.34417782801617697No Hit
TACAGTACTGTGATAACTGAAGA344050.3366531578124913No Hit
TATTGCACTTGTCCCGGCCTGTAA311860.3051552210300931No Hit
TGAGGTAGTAGTTTGTGCTGA308460.3018283187293738No Hit
TGAGGTAGTAGGTTGTGTGGTTA305670.29909830184143066No Hit
AAACCGTTACCATTACTGAGTCA302790.29628021989258607No Hit
TCCTGTACTGAGCTGCCCCGA301650.2951647291211684No Hit
TACAGTATAGATGATGTACTA298130.29172040673924726No Hit
AAACCGTTACCATTACTGAGAA278480.2724928684424432No Hit
TGAGGTAGTAGTTTGTACAGTCA268900.2631188319598282No Hit
A268690.262913346817725No Hit
TGAGGTAGTAGTTTGTGCTGTCA265060.2593613893613688No Hit
CATTGCACTTGTCTCGGTCTGA257140.25161166400204626No Hit
TGAGGTAGTAGATTGTATAGCA243400.23816706470443358No Hit
TGAGGTAGTAGATTGTATAGTCA228990.2240668699534439No Hit
AATTGCACGGTATCCATCTGTAA210300.20577869230625467No Hit
TATTGCACTTGTCCCGGCCTGTTA210110.20559277717768507No Hit
TGGAGAGAAAGGCAGTTCCTGAA203500.19912488770481607No Hit
AGCAGCATTGTACAGGGCTATGAA203460.1990857476777488No Hit
TGAGGTAGTAGATTGTATAGA199590.19529895005898892No Hit
ACCACAGGGTAGAACCACGGAA199110.1948292697341815No Hit
TATTGCACTTGTCCCGGCCTGCA196840.19260807319811302No Hit
CAACGGAATCCCAAAAGCAGCTA193650.189486656039497No Hit
TGAGGTAGTAGATTGTATA192910.1887625655387522No Hit
AAACCGTTACCATTACTGGGTA187630.1835960819658705No Hit
TTCAAGTAATCCAGGATAGGCTA178800.17495592099076718No Hit
AGGGCTGGGTCGGTCGGGCTGGGGCGA175560.17178557879831702No Hit
TACAGTACTGTGATAACTGAAA170840.1671670556043773No Hit
AATTGCACGGTATCCATCTGTA167890.16428047860816497No Hit
TACAGTACTGTGATAACTGAA164600.16106121138188073No Hit
TACCACAGGGTAGAACCACGGAA160730.15727441376312085No Hit
TGAGGTAGTAGTTTGTACAGCA159330.15590451281576584No Hit
TAGCTTATCAGACTGATGTTGAA158710.1552978423962229No Hit
TCAGTGCACTACAGAACTTTGTA157790.15439762177367533No Hit
TGAGGTAGTAGTTTGTGCTA157400.1540160065097693No Hit
CAAAGTGCTGTTCGTGCAGGTAGA152570.14928984824139455No Hit
GTACAGTACTGTGATAACTGAA152500.1492213531940268No Hit
TAGCAGCACGTAAATATTGGCA146320.14317421901213118No Hit
AAACCGTTACTATTACTGAGTA145820.1426849686737901No Hit
TCGTACCGTGAGTAATAATGCGA145290.14216636331514856No Hit
CCGCACTGTGGGTACTTGCTA137920.13495481332800116No Hit
TGAGGGGCAGAGAGCGAGACTA137820.13485696326033295No Hit
TCCTGTACTGAGCTGCCCCGAAA136980.13403502269191994No Hit
AGACCGTTACCATTACTGAGTA135440.13252813164982943No Hit
TAGCTTATCAGACTGATGTTGA127610.12486647135140827No Hit
AGAGGTAGTAGGTTGCATAGTA124160.12149064401685487No Hit
TGAGGTAGTAGGTTGTATAGA116920.11440629911767615No Hit
GAACCGTTACCATTACTGAGTA115090.11261564287934783No Hit
CATTGCACTTGTCTCGGTCTGTA114810.11234166268987683No Hit
TATTGCACTTGTCCCGGCCTGA114670.11220467259514133No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACCA114170.11171542225680026No Hit
AAACCGTTACCATTACTGAAA113460.11102068677635595No Hit
TGAGGTAGTAGTTTGTACA111770.10936702063276312No Hit
TAAAGTGCTTATAGTGCAGGTAGA110070.10770356948240348No Hit
CCCCCCACTGCTAAATTTGACTGGCTTA109400.10704797402902645No Hit
TGAGGTAGTAGATTA107980.10565850306813779No Hit
AAACCGTTACCATTACTGAA103890.10165643530050783No Hit
AAACCGTTACCATTACCGAGTA102690.10048223448848927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)