FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007984844

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007984844
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71394675
Sequences flagged as poor quality0
Sequence length150
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCGG2264310.31715390538580085No Hit
GCGGGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCG2156700.30208135270592656No Hit
GCTCGGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCG2120350.29698993657440137No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1175390.16463272646034174No Hit
GCGGGGACGGCGCTCCGCCCGCCCCGCGGGGCGGCCCCGACGTCCGGGCG1106010.15491491487285292No Hit
GGCCCGGCGAGGGGGAGAGGCGACGGGAGAGAGAGCGCGCGGCCGACGGC1024590.1435107030041106No Hit
GGGAGGGACCACCGGGCCGCGCTCGGGCGCACGCGCGCGCCGAACGGGGC961920.13473273742054293No Hit
GGGCGGAGGAGAGTAGTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTAC908060.12718875742483596No Hit
GGGGCACGGGCCGGGGGCGGGACGGGCGCCGCACGCCCCGACCCGTCTCC840810.11776928741534295No Hit
GGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCGGGCG832130.11655351046839278No Hit
GGGGGAGAGGCGACGGGAGAGAGAGCGCGCGGCCGACGGCACCCCCGCGC797110.11164838274002928No Hit
GCCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGCGCGGCG795760.11145929300749671No Hit
GGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCGGGCGC779090.10912438497689078No Hit
CCACCACCACCGTCGCTCGTGATTCTCGTCCATCCTCCGACCCGGTCCCG769830.10782736947818589No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT755720.10585103160704913No Hit
GGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCGGGC746410.10454701278491708No Hit
GCCACCACCACCGTCGCTCGTGATTCTCGTCCATCCTCCGACCCGGTCCC714420.10006628645623782No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)