FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007984856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007984856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70006992
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGGAGGAGAGTAGTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTAC1751310.25016215523158025No Hit
AGGCAGAATCCAGATGCTCAAGGCCCTTCATAATATCCCCCAGTTTAGTA1216220.1737283613042537No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1082900.15468454922331187No Hit
GGCGGAGGAGAGTAGTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTACC1035840.1479623635307742No Hit
GGACAGCAAGAAAGCGAGCTTAGTGATACTTGTGGGCCAGGGCATTAGCC963100.13757197281094438No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC747600.10678933327116812No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)