FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007984861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007984861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69799109
Sequences flagged as poor quality0
Sequence length150
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCCGGCGTCCCAGCGGGTTGGGACGCGGCGGCCGGCGGGCGGTGGGTG1175140.1683603153157729No Hit
GGGGCCTCGGCCCCGGTCGCGGTCCCCCGTCCCGGGCGGGGGCGGGCGCG1119880.1604433088107185No Hit
CGGCCCCGGTCGCGGTCCCCCGTCCCGGGCGGGGGCGGGCGCGCCGGCCG947020.13567794969990232No Hit
GCCCGGCGTCCGGCCGACCGCCGCTCCCGCGCCCCTCCTCCTCCCCGCCG940020.134675071568607No Hit
GCGGCGCCGCCGCCGCCCGCGAAGACGGAGAGGGAAAGAGAGAGCCGGCT931060.13339138756054894No Hit
GCCCGGCGTCCCAGCGGGTTGGGACGCGGCGGCCGGCGGGCGGTGGGTGT929110.13311201436683096No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG919160.13168649473734687No Hit
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAG917170.13140139081145005No Hit
CCCGCGGGACGCCGCGGTGTCGTCCGCCGTCGCGCGCCCGCCTCCGGCTC863380.12369498871396768No Hit
AGCGAGGGTTCCGCCGGCCACCGCGGTGGTGGCCGAGTGCGGCTCGTCGC853010.12220929639660585No Hit
CCGCGGTGTCGTCCGCCGTCGCGCGCCCGCCTCCGGCTCGCGGCCGCGCC821170.11764763358225676No Hit
GTCCGAGCCGCGACGGGCGAGGGGCGGACGTTCGTGGCGAACGGGACCGT814640.11671209155406269No Hit
GGCGGCTCCGCCGCCGCGTCCTCGGACCCGTCCCCCCGACCTCCGCGGGG807210.11564760805184489No Hit
GGCGGCGCCGCCGCCGCCCGCGAAGACGGAGAGGGAAAGAGAGAGCCGGC765990.10974208854156005No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT764680.10955440706270335No Hit
GCTCGGGACGGGGCCCCGGCGCGGCGCGGCGCGGCCGCGAGCCGGAGGCG746750.10698560636354255No Hit
CCGGCGTCCCAGCGGGTTGGGACGCGGCGGCCGGCGGGCGGTGGGTGTGC735950.1054383086752583No Hit
CGGGTCGGGGCGTGCGGCGCCCGTCCCGCCCCCGGCCCGTGCCCCTCCCT725040.10387525147348227No Hit
GGTCCGAGCCGCGACGGGCGAGGGGCGGACGTTCGTGGCGAACGGGACCG723940.10371765633856445No Hit
CCGGCGGCGACCCGCGGGACGCCGCGGTGTCGTCCGCCGTCGCGCGCCCG718540.10294400749442231No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)