FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007984868

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007984868
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68523775
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGGAGGAGAGTAGTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTAC1835460.2678573969399672No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1404760.20500329994954306No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT1226230.1789495689634729No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1088230.15881057341046956No Hit
GGCGGAGGAGAGTAGTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTACC1046940.15278492756711082No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT845240.12334988841464149No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT834130.12172855333787433No Hit
GGGAGGGACCACCGGGCCGCGCTCGGGCGCACGCGCGCGCCGAACGGGGC748270.10919859566989705No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)