FastQCFastQC Report
Wed 31 May 2023
EGAF00007984870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007984870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68599828
Sequences flagged as poor quality0
Sequence length150
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGGAGGAGAGTAGTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTAC1915680.2792543444861116No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1579120.2301929969853569No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1564180.2280151489592656No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT1535910.2238941473730809No Hit
GGGAGGGACCACCGGGCCGCGCTCGGGCGCACGCGCGCGCCGAACGGGGC1527610.22268423180303018No Hit
GCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT1430960.20859527519515064No Hit
GCGGGGACGGCGCTCCGCCCGCCCCGCGGGGCGGCCCCGACGTCCGGGCG1365430.19904277311015997No Hit
AGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTG1321990.19271039571702717No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1154600.16830945990126972No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA1084180.1580441280406709No Hit
GGAGGGACCACCGGGCCGCGCTCGGGCGCACGCGCGCGCCGAACGGGGCG1074630.15665199627031134No Hit
GGCGGAGGAGAGTAGTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTACC1017840.14837354985788012No Hit
GTCTGAATTGGGTTATGAGGTCCCCTGCGGGGTACCTCACCTCAGCCATT936550.1365236659193956No Hit
GTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGT934450.13621754270287675No Hit
GCCACCACCACCGTCGCTCGTGATTCTCGTCCATCCTCCGACCCGGTCCC916190.1335557284487652No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT900460.13126271978407877No Hit
GGCAGAGACAGAGGCGGCGGCCCGGGGGATCCGGTACCCCCAAGGCACGC872180.12714026046829155No Hit
GGGGGGAAGAAGAGGATCGGCGGGCGGCGGGCGGGGAAGAGGGCACAGAC866150.1262612495180017No Hit
CAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTT857100.1249420042277657No Hit
GCGGGGCGGGCTCCCGGCCCCGGCCGACGCGCCGCGAGGCGAGCCGGGCG854140.12451051626543436No Hit
GCCGGGGAGAGCGAGCGGGGCCGTGCCCGGCGGCGCGGAGCGGCGCGGCG833870.12155569836122622No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCA816480.11902070658252961No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG803210.11708629940005097No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC782630.11408629187816621No Hit
CCATCCTCCGACCCGGTCCCGCTCCGGGAGACCGGCGCGCCCCCACCGTG728260.1061606160295329No Hit
GGGGGGCCGCCCGCAAGTCGACAACCACTGGAGGCGACAGCGAGGGCTGT721130.10512125482297129No Hit
GGGGTCTTTAAACCTCCGCGCCGGAACGCGCTAGGTACCTGGACGGCGGG713610.1040250421619133No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT697940.10174077987484167No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)