FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96930346
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGTATCGTTCCGCCTGGGCGGG4653310.4800674084047941No Hit
CGTTCGTTATCGGAATTAACCAGACA2633160.2716548644116054No Hit
CCACCTACTAAGAACGGCCATGCACC1588950.16392699145012854No Hit
CAGTCCTTAGAGCCAATCCTTATCCC1270860.1311106431003558No Hit
GTCTCGTTCGTTATCGGAATTAACCA1250220.12898127898976036No Hit

[OK]Adapter Content

Adapter graph