FastQCFastQC Report
Mon 4 Sep 2023
EGAF00007987197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007987197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97616704
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGTATCGTTCCGCCTGGGCGGG4653290.4766899320837548No Hit
CGTTCGTTATCGGAATTAACCAGACA2657210.2722085351293975No Hit
CCACCTACTAAGAACGGCCATGCACC1608990.1648273229958676No Hit
CAGTCCTTAGAGCCAATCCTTATCCC1269110.1300095114868865No Hit
GTCTCGTTCGTTATCGGAATTAACCA1248610.12790946106928583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)